The collection and processing of the data are fully described in our manuscript.
data(featureDat)
A data frame, including all human proteins (row) and their features.
#> Length ArgRatio LysRatio SerRatio ThrRatio TyrRatio #> H3C1 136 0.1323529 0.09558824 0.03676471 0.07352941 0.02205882 #> H3C10 136 0.1323529 0.09558824 0.03676471 0.07352941 0.02205882 #> H3C11 136 0.1323529 0.09558824 0.03676471 0.07352941 0.02205882 #> H3C12 136 0.1323529 0.09558824 0.03676471 0.07352941 0.02205882 #> H3C2 136 0.1323529 0.09558824 0.03676471 0.07352941 0.02205882 #> H3C3 136 0.1323529 0.09558824 0.03676471 0.07352941 0.02205882 #> Acetylation_1 Acetylation_2 Methylation_1 Methylation_2 Methylation.K_1 #> H3C1 0.9230769 0.9230769 1.645161 1.290323 2.846154 #> H3C10 0.9230769 0.9230769 1.645161 1.290323 2.846154 #> H3C11 0.9230769 0.9230769 1.645161 1.290323 2.846154 #> H3C12 0.9230769 0.9230769 1.645161 1.290323 2.846154 #> H3C2 0.9230769 0.9230769 1.645161 1.290323 2.846154 #> H3C3 0.9230769 0.9230769 1.645161 1.290323 2.846154 #> Methylation.K_2 O-GalNAc_1 O-GlcNAc_1 O-GlcNAc_2 Phosphorylation_1 #> H3C1 2.461538 0 0 0 0.8333333 #> H3C10 2.461538 0 0 0 0.8333333 #> H3C11 2.461538 0 0 0 0.8333333 #> H3C12 2.461538 0 0 0 0.8333333 #> H3C2 2.461538 0 0 0 0.8333333 #> H3C3 2.461538 0 0 0 0.8333333 #> Phosphorylation_2 Sumoylation_1 Sumoylation_2 Ubiquitination_1 #> H3C1 0.7222222 0.4615385 0.07692308 0.7692308 #> H3C10 0.7222222 0.4615385 0.07692308 0.7692308 #> H3C11 0.7222222 0.4615385 0.07692308 0.7692308 #> H3C12 0.7222222 0.4615385 0.07692308 0.7692308 #> H3C2 0.7222222 0.4615385 0.07692308 0.7692308 #> H3C3 0.7222222 0.4615385 0.07692308 0.7692308 #> Ubiquitination_2 DisorderFraction nInteract nComplex Nbind MOLT4_RNA #> H3C1 0.7692308 0.5 0 11 6 0.4746883 #> H3C10 0.7692308 0.5 0 0 6 1.6233960 #> H3C11 0.7692308 0.5 0 0 6 0.6763736 #> H3C12 0.7692308 0.5 0 0 6 1.3601900 #> H3C2 0.7692308 0.5 0 0 6 0.9941940 #> H3C3 0.7692308 0.5 0 0 6 0.9082736 #> Detectability MOLT4_Protein MLN4924_DMSO.PSI MLN4924.PSI SCF_DMSO.PSI #> H3C1 0.4039735 -1.02466e-16 5.230928 5.368840 5.852280 #> H3C10 0.0000000 0.00000e+00 5.449404 5.439552 5.923710 #> H3C11 0.0000000 0.00000e+00 4.783124 4.769544 4.938492 #> H3C12 0.0000000 0.00000e+00 5.347384 5.279281 5.468003 #> H3C2 0.0000000 0.00000e+00 5.293384 5.355600 5.911333 #> H3C3 0.0000000 0.00000e+00 4.985515 4.952945 5.290316 #> SCF.PSI CRL3_DMSO.PSI CRL3.PSI CRL4_DMSO.PSI CRL4.PSI GPSseq #> H3C1 5.661463 4.832062 5.070383 5.253885 5.226082 3.346000 #> H3C10 5.725113 4.788904 4.989027 5.242304 5.047854 4.464333 #> H3C11 4.955726 5.065305 5.035213 4.863561 4.934241 3.745176 #> H3C12 5.472939 4.863619 4.773200 4.759435 4.621406 3.161364 #> H3C2 5.707390 4.804929 5.006510 5.233165 4.983627 2.909500 #> H3C3 5.215693 4.797161 4.871650 4.931282 5.063002 4.196167 #> Cterminome Nterminome Mathieson2018_Bcells_Halflife #> H3C1 3.336714 3.777278 47.03575 #> H3C10 3.345924 4.253944 47.03575 #> H3C11 3.593000 2.961845 31.77150 #> H3C12 3.356333 3.143757 18.58100 #> H3C2 3.396666 3.128042 43.67375 #> H3C3 3.490575 3.624761 34.56825 #> Mathieson2018_NKs_Halflife Mathieson2018_Hepatocytes_Halflife #> H3C1 56.91250 56.1275 #> H3C10 73.44600 27.9140 #> H3C11 27.19650 82.9980 #> H3C12 65.78600 64.3065 #> H3C2 45.15188 56.1275 #> H3C3 53.94400 103.9658 #> Mathieson2018_Monocytes_Halflife Mathieson2018_mNeurons_Halflife #> H3C1 52.16250 14.09950 #> H3C10 44.76817 14.09950 #> H3C11 48.05933 16.64000 #> H3C12 42.84988 55.35474 #> H3C2 30.94833 15.82575 #> H3C3 68.34300 19.83900 #> Boisvert2012_Hela_Whole_Turnover Boisvert2012_Hela_Cytoplasm_Turnover #> H3C1 18.82838 18.15292 #> H3C10 18.82838 18.15292 #> H3C11 8.29295 18.15292 #> H3C12 18.82838 18.15292 #> H3C2 18.82838 18.15292 #> H3C3 20.32765 24.34705 #> Boisvert2012_Hela_Nucleus_Turnover Boisvert2012_Hela_Nucleolus_Turnover #> H3C1 19.25484 16.6468 #> H3C10 19.25484 16.6468 #> H3C11 16.82780 7.8234 #> H3C12 19.25484 16.6468 #> H3C2 19.25484 16.6468 #> H3C3 26.90645 16.6468 #> Selbach2011_NIH3T3_Halflife Zecha2018_Hela_Halflife MOLT4_H3K27ac #> H3C1 79.67 14.16565 0.172 #> H3C10 79.67 21.62020 0.465 #> H3C11 79.67 32.13072 0.245 #> H3C12 71.22 35.89567 0.863 #> H3C2 79.67 14.35671 0.094 #> H3C3 79.67 36.03358 0.083