The latest version of BINOCh is BINOCh.1.0.0.
Installation instructions for Unix-like operating systems (UNIX, Linux, or Mac OS X):
BINOCh-x.x.x.tar.gz
by typing on the command line:
tar -xvf BINOCh-x.x.x.tar.gz
cd BINOCh-x.x.x/src/cistrome/data/
datapath.conf.sample
to datapath.conf
:
cp datapath.conf.sample datapath.conf
src/cistrome/data/datapath.conf
to point to the genome sequence and PhastCons files.
DO NOT edit the src/cistrome/data/datapath.conf.sample
file../BINOCh-x.x.x
) and run the installation script:
cd ../../../
python setup.py build
python setup.py install
/usr/local/bin
.
If you wish to install this package locally in the base directory $HOME/local
do this:
python setup.py install --prefix $HOME/local
.bashrc
in case of bash shell) to specify the path to your python packages.
This line should look similar to this:
export PYTHONPATH=$PYTHONPATH:$HOME/lib/python2.5/site-packages
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