Chapter 11 ChIP-seq, Expression Integration

11.1 Motif finding in eukaryotes, and ChIP-seq

11.2 MACS and ChIP-seq QC

11.3 Identify TF interactions from ChIP-seq motifs

11.4 TF target genes and expression integration

11.5 Lab 5

11.5.1 MACS Tutorial

11.5.2 ChIP-seq QC Tutorial

11.5.3 TF Motif Finding Tutorial

11.5.4 TF Collaborator Tutorial